Circwave v1.4 software

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August undefined, 2024

WebFeb 19, 2014 · CircWave v1.4 analyses software (Dr. Roelof A. Hut, http://www.euclock.org) was used to analyze the rhythmicity of gene expression patterns, by a harmonic regression method with an assumed period of 24 h and with α set at 0.05. Points represent mean and error bars represent the standard error of the mean (±SEM). WebDoes anyone recommend a particular software, or is it best to do the analysis manually on Prism (Graphpad)? From a preliminary search, I came across papers that used: - …

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WebBonferroni analysis (SPSS 18 software). For the time series, multivariate analysis of variance was performed by Duncan’s test. Data are presented as means±SEM. Signiﬁcance was accepted at P <0:05. Matrices for Pearson’s r correlation coeﬃcients were generated in GraphPad Prism (7.03) soft-ware. Rhythmicity was detected by … WebFeb 19, 2016 · Rhythmicity and phase of qPCR clock gene expression profiles were determined using CircWave v1.4 (developed by Roelof Hut, University of Groningen, … jc radio la bruja

Activity pattern, budget and diurnal rhythmicity of the ... - Springer

WebI would like to suggest you that for the cosinor analysis purpose you will be using circwave software. In this software you should analysis your individual time point data either fitter … WebPlot: a program to quickly look at data as either Car- tesian plots or actograms. Acro: a program to calculate the acrophase (time of peak) of circadian rhythms through a fitted … kymriah fda

(PDF) The Daily Expression of ABCC4 at the BCSFB Affects

What is the best approach to analyzing circadian activity …

WebFeb 15, 2016 · P values were considered statistically significant at p < 0.05. In addition, data were analyzed using the Circwave 1.4 software to test the daily rhythmicity of gene expression. P values reported are the result of the F-test, and the 24 h rhythm was confirmed if p < 0.05. ... For Circwave V1.4 analysis see Tables S6. Circwave analysis … Webusing sine curve fitting with CircWave v1.4 (Oster et al., 2006). RESULTS Synergistic Interaction of Per1 and Dec1/2 under Entrained Conditions Per1/Dec double and triple mutant mice were born at the expected Mendelian ratios—taking into account that both Dec genes are located relatively close together on the same chromosome kymriah fda orphan drug designationWebNov 21, 2024 · The existence of a diurnal 24-h rhythm was analyzed using the CircWave v1.4 software as described earlier (Oster et al., 2006a, Oster et al., 2006b). For … kymriah fda indication

"WebNov 21, 2024 · The existence of a diurnal 24-h rhythm was analyzed using the CircWave v1.4 software as described earlier ( Oster et al., 2006a, Oster et al., 2006b ). For CircWave analysis, we included the ZT0, ZT4, ZT8, ZT12, ZT16, and ZT20 but not the ZT24 values as we sometimes observed differences between ZT0 and ZT24 values. Results " - Circwave v1.4 software

Circwave v1.4 software

(PDF) Circadian Clock Regulation of Hepatic Lipid Metabolism by ...

WebAug 8, 2024 · Version: 1.4. Downloaded: 1997. Writer: Roelof A. Hut (University of Groningen). Download. CircWave analyses independent circadian data (ie, one specific … WebJan 9, 2016 · If you want to test if there is a significant circadian rhythm in your synchronised cells vs. your unsynchonised cells you can use the …

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WebMay 13, 2015 · CircWave v1.4 software (www.hutlab.nl; www.euclock.org) was used to detect rhythmicity of host CC gene expression, hepanoid CC gene expression, microbial … WebAug 9, 2024 · Download and install the zip data by dual clicking “CircWave V1.4” above, unbox, and implement the CircWave.exe without installing. Read the CircWave.doc apply …

WebNov 2, 2011 · For circadian profiles, rhythmicity of curves was determined by CircWave v1.4 software [http:/hutlab.nl; R. A. Hut, University of Groningen; ] For survival curve … WebThe conception of novel anticancer delivery systems and the combination of chronobiology with nanotechnology may provide a powerful tool to optimize cancer therapy. In this work, polyethylenimine (PEI) has been used to complex p53 encoded plasmid DNA (pDNA), and the anticancer drug methotrexate (MTX) has also been loaded into the vectors. To …

WebJan 29, 2024 · The rhythmicity of the daily activity was tested by Circwave v1.4 (www.hutlab.nl) software and the variation between time points was checked by the Kruskal-Wallis test. Circwave fits sine wave through the data points to determine the rhythmicity of the curve by comparing it to the horizontal data mean line and provides F … WebJTK-cycle, COSOPT and CircWave are all aimed at gene expression data with relatively low sampling rates (~ 1 sample per hour or so). CircWave is an F-tested forward harmonic regression procedure ...

WebJun 25, 2024 · Cosinor (one sine wave) and related Circwave analysis (one sine wave with up to two additional harmonics) were also used to test for 24-h sinusoidal patterns of …

WebFeb 10, 2011 · In the CircWave graphs, each dot represents the normalized relative mRNA level from the eWAT of an individual mouse. The curve represents the best-fit fourier curve, with the center of gravity (phase) represented by the vertical bar intersecting with the horizontal bar which represents the mean of the entire data set (liver; p≤0.002). kymriah fda label 2020WebFeb 19, 2016 · Values are based on sine wave fits generated with CircWave v1.4 software. Highlighted in bold are significant differences (p ≤0.05) between wild-type and Clock-/- … kymriah launch dateWebFeb 23, 2024 · the CircWave v1.4 software (Dr. Roelof A. Hut, Groningen, Netherlands) [66,67]. Statisti-cally significan t rhythms were considered whe n p < 0.05. Note that in the presence of . kymriah laboratoireWebDec 10, 2024 · In the liver, CircWave analysis indicated the absence of diurnal rhythmicity in the expression pattern of Bmal1, Cry2, Per1, Per2, and Rev-Erbα1 ( Figures 5 A and 5C–5F) Pitx3ak mice, and one-way ANOVA confirmed that the expression of these genes did not change significantly as a function of time, in contrast to what was observed in control … jc radio la bruja 10+7WebMay 13, 2015 · CircWave v1.4 software (www.hutlab.nl; www.euclock.org) was used to detect rhythmicity of host CC gene expression, hepanoid CC gene expression, microbial metabolites, and microbial gene expression by applying Fourier curve fit analyses. Author Contributions. V.L. and E.B.C. were involved in all aspects of these experiments. kymriah label 2022WebJun 1, 2015 · CircWave v1.4 software ( www.huttlab.nl, www.euclock.org; an extension of the cosinor analysis, courtesy of Dr. Roelof Hut) ( van der Veen, Mulder, Oster, Gerkema, & Hut, 2008) was used to analyze the rhythmicity of feeding and locomotor activity by fitting a Fourier curve (one sine wave with up to two additional harmonics) to the data, and … kymriah labelWebJan 16, 2014 · CircWave v1.4 software (www.huttlab.nl, www.euclock.org; an extension of the Cosinor analysis, courtesy of Dr. Roelof Hut) was used to analyze the rhythmicity of gene expression by fitting a ... jc radio la bruja whatsapp